BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028A07LP1|AL428827
(817 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1528 1569 0.0
>3x_Contig1528
Length = 10737
Score = 1569 bits (788), Expect = 0.0
Identities = 810/818 (99%), Gaps = 2/818 (0%)
Strand = Plus / Plus
Query: 1 gatcctgtctatcactatcattcgaattatgattcgttccattggatggctaccatgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6168 gatcctgtctatcactatcattcgaattatgattcgttccattggatggctaccatgcaa 6227
Query: 61 gatccaggattcaagctacacaatgctgtcgccaaactatttggtaccattgccttgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6228 gatccaggattcaagctacacaatgctgtcgccaaactatttggtaccattgccttgaga 6287
Query: 121 ttatccgaagataagataataaattccaaggtctcggactactcaactgagttaactaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6288 ttatccgaagataagataataaattccaaggtctcggactactcaactgagttaactaaa 6347
Query: 181 tactacaaacacatccaagaaagcgttccagaacagtggttaaatattactaaccacaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6348 tactacaaacacatccaagaaagcgttccagaacagtggttaaatattactaaccacaga 6407
Query: 241 ggtaccccattgagtaagctgatccataaaacaagcaagaaattggacaaacttgtatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6408 ggtaccccattgagtaagctgatccataaaacaagcaagaaattggacaaacttgtatca 6467
Query: 301 tctgccgactattttgatgagtacttaactgatctaaacaaacaatgggaagataagaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6468 tctgccgactattttgatgagtacttaactgatctaaacaaacaatgggaagataagaac 6527
Query: 361 tctctaccatggtggaggcgcataaagttgcatttccagattgtacacgtgaatttcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6528 tctctaccatggtggaggcgcataaagttgcatttccagattgtacacgtgaatttcaaa 6587
Query: 421 ttgttctaccttgagagaaacttcctacacgaagaaggtttgavaggcagaccatggttc 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6588 ttgttctaccttgagagaaacttcctacacgaagaaggtttgaaaggcagaccatggttc 6647
Query: 481 aaacacgtggtctttgcatctggtaagartactggttatgaagggtttgccttaccaggt 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 6648 aaacacgtggtctttgcatctggtaagaatactggttatgaagggtttgccttaccaggt 6707
Query: 541 ttgaaggaagccttagacgacaaagatgtcaaggatttcattcattggaacaaaatattc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6708 ttgaaggaagccttagacgacaaagatgtcaaggatttcattcattggaacaaaatattc 6767
Query: 601 ctgcacacgatcaagaggttagctcatgaattcgacctcaagaaataagtagatactgtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6768 ctgcacacgatcaagaggttagctcatgaattcgacctcaagaaataagtagatactgtt 6827
Query: 661 tctgaatcacatgaaaatacgcttacmagacctatgctggtgcataggcactattgctct 720
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 6828 tctgaatcacatgaaaatacgcttacaagacctatgctggtgcataggcactattgctct 6887
Query: 721 taataattvabactgcagtgaagcgctgaaattaagacattacttgtgtacgcattgaag 780
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6888 taataattaaaactgcagtgaagcgctgaaattaagacattacttgtgtacgcattgaag 6947
Query: 781 aagggaagacgtgct-acgtaatgaggaaaatwgttaa 817
||||||||||||||| |||| ||||||||||| |||||
Sbjct: 6948 aagggaagacgtgctaacgt-atgaggaaaatagttaa 6984
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5469
Number of Sequences: 1807
Number of extensions: 5469
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 817
length of database: 10,358,551
effective HSP length: 16
effective length of query: 801
effective length of database: 10,329,639
effective search space: 8274040839
effective search space used: 8274040839
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)